Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.42■□□□□ 0.7
NeflP08551 Gm4459-201ENSMUST00000118750 468 ntBASIC19.42■□□□□ 0.7
NeflP08551 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NeflP08551 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.42■□□□□ 0.7
NeflP08551 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.42■□□□□ 0.7
NeflP08551 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NeflP08551 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NeflP08551 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NeflP08551 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.41■□□□□ 0.7
NeflP08551 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NeflP08551 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NeflP08551 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.41■□□□□ 0.7
NeflP08551 Gm27742-201ENSMUST00000184667 60 ntBASIC19.41■□□□□ 0.7
NeflP08551 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.41■□□□□ 0.7
NeflP08551 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.41■□□□□ 0.7
NeflP08551 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.41■□□□□ 0.7
NeflP08551 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.41■□□□□ 0.7
NeflP08551 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC19.41■□□□□ 0.7
NeflP08551 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NeflP08551 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.4■□□□□ 0.7
NeflP08551 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
NeflP08551 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.4■□□□□ 0.7
NeflP08551 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NeflP08551 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
NeflP08551 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
NeflP08551 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
NeflP08551 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NeflP08551 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NeflP08551 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NeflP08551 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NeflP08551 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NeflP08551 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NeflP08551 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Olfr129-201ENSMUST00000122318 993 ntBASIC19.39■□□□□ 0.69
NeflP08551 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.39■□□□□ 0.69
NeflP08551 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NeflP08551 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.39■□□□□ 0.69
NeflP08551 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.39■□□□□ 0.69
NeflP08551 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NeflP08551 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NeflP08551 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NeflP08551 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.39■□□□□ 0.69
NeflP08551 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms