Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa3P02831 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa3P02831 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.52□□□□□ -0.41
Hoxa3P02831 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa3P02831 App-207ENSMUST00000227737 2827 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Gm27301-201ENSMUST00000184012 127 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxa3P02831 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxa3P02831 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa3P02831 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.51□□□□□ -0.41
Hoxa3P02831 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm12008-201ENSMUST00000117791 755 ntBASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm16198-201ENSMUST00000118766 670 ntBASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm45612-201ENSMUST00000211320 160 ntBASIC12.5□□□□□ -0.41
Hoxa3P02831 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxa3P02831 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxa3P02831 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.49□□□□□ -0.41
Hoxa3P02831 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Hoxa3P02831 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxa3P02831 Gm9385-201ENSMUST00000117563 472 ntBASIC12.49□□□□□ -0.41
Hoxa3P02831 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxa3P02831 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms