Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vti1aO89116 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vti1aO89116 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Gm16198-201ENSMUST00000118766 670 ntBASIC16.08■□□□□ 0.16
Vti1aO89116 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.08■□□□□ 0.16
Vti1aO89116 Rpph1-201ENSMUST00000175096 319 ntBASIC16.08■□□□□ 0.16
Vti1aO89116 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.08■□□□□ 0.16
Vti1aO89116 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.08■□□□□ 0.16
Vti1aO89116 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.08■□□□□ 0.16
Vti1aO89116 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.08■□□□□ 0.16
Vti1aO89116 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vti1aO89116 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vti1aO89116 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.08■□□□□ 0.16
Vti1aO89116 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vti1aO89116 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.08■□□□□ 0.16
Vti1aO89116 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Vti1aO89116 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Vti1aO89116 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.07■□□□□ 0.16
Vti1aO89116 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.07■□□□□ 0.16
Vti1aO89116 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Vti1aO89116 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.07■□□□□ 0.16
Vti1aO89116 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.07■□□□□ 0.16
Vti1aO89116 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vti1aO89116 Sybu-209ENSMUST00000228639 4113 ntBASIC16.07■□□□□ 0.16
Vti1aO89116 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.06■□□□□ 0.16
Vti1aO89116 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.06■□□□□ 0.16
Vti1aO89116 Gm27430-201ENSMUST00000184585 107 ntBASIC16.06■□□□□ 0.16
Vti1aO89116 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.06■□□□□ 0.16
Vti1aO89116 Gm44333-201ENSMUST00000197168 107 ntBASIC16.06■□□□□ 0.16
Vti1aO89116 Gm7774-201ENSMUST00000200064 533 ntBASIC16.06■□□□□ 0.16
Vti1aO89116 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vti1aO89116 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.05■□□□□ 0.16
Vti1aO89116 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Vti1aO89116 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vti1aO89116 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Mir449b-201ENSMUST00000104833 80 ntBASIC16.05■□□□□ 0.16
Vti1aO89116 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.05■□□□□ 0.16
Vti1aO89116 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.05■□□□□ 0.16
Vti1aO89116 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vti1aO89116 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Vti1aO89116 Gm22175-201ENSMUST00000175007 78 ntBASIC16.05■□□□□ 0.16
Vti1aO89116 Gm27321-201ENSMUST00000185021 205 ntBASIC16.05■□□□□ 0.16
Vti1aO89116 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vti1aO89116 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms