Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.54□□□□□ -0.24
Abcd4O89016 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm13597-201ENSMUST00000121239 375 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Mir1895-201ENSMUST00000122615 79 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.53□□□□□ -0.24
Abcd4O89016 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Abcd4O89016 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Abcd4O89016 Chchd1-203ENSMUST00000224633 557 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 BC037039-201ENSMUST00000192003 2205 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Abcd4O89016 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Abcd4O89016 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Abcd4O89016 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.53□□□□□ -0.24
Abcd4O89016 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Abcd4O89016 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.52□□□□□ -0.24
Abcd4O89016 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Abcd4O89016 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Abcd4O89016 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Abcd4O89016 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Abcd4O89016 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Abcd4O89016 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.52□□□□□ -0.25
Abcd4O89016 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.52□□□□□ -0.25
Abcd4O89016 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Abcd4O89016 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Abcd4O89016 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.51□□□□□ -0.25
Abcd4O89016 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Abcd4O89016 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Gm14722-201ENSMUST00000118943 689 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Gm5177-201ENSMUST00000183092 997 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Gm27494-201ENSMUST00000184735 189 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Thap2-203ENSMUST00000218989 527 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abcd4O89016 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Abcd4O89016 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.51□□□□□ -0.25
Abcd4O89016 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms