Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm11452-201ENSMUST00000122376 690 ntBASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm27459-201ENSMUST00000184860 107 ntBASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm6376-201ENSMUST00000209407 580 ntBASIC10.58□□□□□ -0.72
Sh2d1aO88890 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Birc2-201ENSMUST00000054878 378 ntBASIC10.58□□□□□ -0.72
Sh2d1aO88890 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sh2d1aO88890 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.57□□□□□ -0.72
Sh2d1aO88890 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.57□□□□□ -0.72
Sh2d1aO88890 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.57□□□□□ -0.72
Sh2d1aO88890 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sh2d1aO88890 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.56□□□□□ -0.72
Sh2d1aO88890 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms