Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.31□□□□□ -0.12
Best1O88870 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Best1O88870 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Best1O88870 Auts2-212ENSMUST00000178555 309 ntBASIC14.3□□□□□ -0.12
Best1O88870 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Best1O88870 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.3□□□□□ -0.12
Best1O88870 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Best1O88870 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.3□□□□□ -0.12
Best1O88870 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Best1O88870 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Best1O88870 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.29□□□□□ -0.12
Best1O88870 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.29□□□□□ -0.12
Best1O88870 Gm29541-201ENSMUST00000191351 678 ntBASIC14.29□□□□□ -0.12
Best1O88870 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Best1O88870 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Best1O88870 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.29□□□□□ -0.12
Best1O88870 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Best1O88870 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.29□□□□□ -0.12
Best1O88870 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.29□□□□□ -0.12
Best1O88870 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Best1O88870 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Best1O88870 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Best1O88870 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Gm6415-201ENSMUST00000118488 348 ntBASIC14.28□□□□□ -0.12
Best1O88870 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.28□□□□□ -0.12
Best1O88870 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.28□□□□□ -0.12
Best1O88870 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Best1O88870 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Best1O88870 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms