Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm6222-201ENSMUST00000120787 396 ntBASIC16.19■□□□□ 0.18
Slc6a20bO88575 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.19■□□□□ 0.18
Slc6a20bO88575 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.19■□□□□ 0.18
Slc6a20bO88575 Gm9396-201ENSMUST00000076703 567 ntBASIC16.19■□□□□ 0.18
Slc6a20bO88575 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc6a20bO88575 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.18■□□□□ 0.18
Slc6a20bO88575 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.18■□□□□ 0.18
Slc6a20bO88575 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.18■□□□□ 0.18
Slc6a20bO88575 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Gm5035-201ENSMUST00000215581 927 ntBASIC16.18■□□□□ 0.18
Slc6a20bO88575 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Slc6a20bO88575 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.17■□□□□ 0.18
Slc6a20bO88575 Gm9229-201ENSMUST00000222777 126 ntBASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Slc6a20bO88575 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a20bO88575 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms