Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gm14140-201ENSMUST00000119999 995 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gm10576-201ENSMUST00000191927 825 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.42□□□□□ -0.1
Dnmt3bO88509 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dnmt3bO88509 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Gm12497-201ENSMUST00000138778 237 ntBASIC14.41□□□□□ -0.1
Dnmt3bO88509 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Gm9727-201ENSMUST00000161387 555 ntBASIC14.41□□□□□ -0.1
Dnmt3bO88509 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
Dnmt3bO88509 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm6550-201ENSMUST00000187574 993 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3bO88509 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.4□□□□□ -0.1
Dnmt3bO88509 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Dnmt3bO88509 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Dnmt3bO88509 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
Dnmt3bO88509 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms