Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf17O88472 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Dupd1-202ENSMUST00000224735 548 ntBASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf17O88472 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Gm19220-201ENSMUST00000222682 803 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf17O88472 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gm15198-201ENSMUST00000117283 177 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gm12390-201ENSMUST00000117897 397 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfrsf17O88472 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms