Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ttc3O88196 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.55■□□□□ 0.08
Ttc3O88196 Gm27437-201ENSMUST00000183429 107 ntBASIC15.55■□□□□ 0.08
Ttc3O88196 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.55■□□□□ 0.08
Ttc3O88196 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Ttc3O88196 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ttc3O88196 Gm27631-201ENSMUST00000184163 466 ntBASIC15.54■□□□□ 0.08
Ttc3O88196 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.54■□□□□ 0.08
Ttc3O88196 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ttc3O88196 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.53■□□□□ 0.08
Ttc3O88196 Gm44344-201ENSMUST00000200287 129 ntBASIC15.53■□□□□ 0.08
Ttc3O88196 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Gm9063-201ENSMUST00000223299 582 ntBASIC15.53■□□□□ 0.08
Ttc3O88196 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Gm27989-201ENSMUST00000184721 107 ntBASIC15.53■□□□□ 0.08
Ttc3O88196 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ttc3O88196 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ttc3O88196 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ttc3O88196 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.52■□□□□ 0.07
Ttc3O88196 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.52■□□□□ 0.07
Ttc3O88196 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ttc3O88196 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ttc3O88196 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ttc3O88196 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
Ttc3O88196 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.51■□□□□ 0.07
Ttc3O88196 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ttc3O88196 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ttc3O88196 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ttc3O88196 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.51■□□□□ 0.07
Ttc3O88196 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.51■□□□□ 0.07
Ttc3O88196 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.51■□□□□ 0.07
Ttc3O88196 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ttc3O88196 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ttc3O88196 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ttc3O88196 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms