Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pde6dO55057 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pde6dO55057 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Pde6dO55057 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pde6dO55057 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pde6dO55057 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Pde6dO55057 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pde6dO55057 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pde6dO55057 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.77□□□□□ -0.52
Pde6dO55057 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pde6dO55057 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pde6dO55057 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pde6dO55057 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.77□□□□□ -0.52
Pde6dO55057 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pde6dO55057 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pde6dO55057 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Pde6dO55057 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm2274-201ENSMUST00000184539 609 ntBASIC11.77□□□□□ -0.53
Pde6dO55057 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.77□□□□□ -0.53
Pde6dO55057 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pde6dO55057 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.77□□□□□ -0.53
Pde6dO55057 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Pde6dO55057 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.77□□□□□ -0.53
Pde6dO55057 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.77□□□□□ -0.53
Pde6dO55057 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pde6dO55057 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.76□□□□□ -0.53
Pde6dO55057 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Gm12441-201ENSMUST00000121806 588 ntBASIC11.76□□□□□ -0.53
Pde6dO55057 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.76□□□□□ -0.53
Pde6dO55057 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.76□□□□□ -0.53
Pde6dO55057 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pde6dO55057 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pde6dO55057 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.76□□□□□ -0.53
Pde6dO55057 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pde6dO55057 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Celf4-206ENSMUST00000224553 1729 ntBASIC11.75□□□□□ -0.53
Pde6dO55057 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pde6dO55057 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.75□□□□□ -0.53
Pde6dO55057 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.75□□□□□ -0.53
Pde6dO55057 Gm15039-201ENSMUST00000118914 875 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms