Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Banf1O54962 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Banf1O54962 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Banf1O54962 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.19■□□□□ 0.02
Banf1O54962 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Banf1O54962 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.19■□□□□ 0.02
Banf1O54962 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.19■□□□□ 0.02
Banf1O54962 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Banf1O54962 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Banf1O54962 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Banf1O54962 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Banf1O54962 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Banf1O54962 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Banf1O54962 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.18■□□□□ 0.02
Banf1O54962 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.18■□□□□ 0.02
Banf1O54962 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Banf1O54962 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Banf1O54962 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Gm23547-201ENSMUST00000158210 271 ntBASIC15.18■□□□□ 0.02
Banf1O54962 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Banf1O54962 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.18■□□□□ 0.02
Banf1O54962 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Banf1O54962 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.18■□□□□ 0.02
Banf1O54962 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Banf1O54962 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Banf1O54962 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Banf1O54962 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Banf1O54962 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Banf1O54962 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Banf1O54962 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.17■□□□□ 0.02
Banf1O54962 Gm43767-201ENSMUST00000198933 381 ntBASIC15.17■□□□□ 0.02
Banf1O54962 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.17■□□□□ 0.02
Banf1O54962 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.17■□□□□ 0.02
Banf1O54962 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.17■□□□□ 0.02
Banf1O54962 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Banf1O54962 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Banf1O54962 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Banf1O54962 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Banf1O54962 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms