Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Gm10499-201ENSMUST00000174094 934 ntBASIC18.9■□□□□ 0.62
ScaperF8VQ70 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ScaperF8VQ70 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ScaperF8VQ70 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ScaperF8VQ70 Syt7-205ENSMUST00000224135 1557 ntBASIC18.89■□□□□ 0.62
ScaperF8VQ70 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ScaperF8VQ70 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Gm14719-201ENSMUST00000121891 340 ntBASIC18.89■□□□□ 0.61
ScaperF8VQ70 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Gm16215-201ENSMUST00000161990 637 ntBASIC18.89■□□□□ 0.61
ScaperF8VQ70 Gm44855-201ENSMUST00000205725 362 ntBASIC18.89■□□□□ 0.61
ScaperF8VQ70 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.89■□□□□ 0.61
ScaperF8VQ70 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ScaperF8VQ70 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm12490-201ENSMUST00000120255 560 ntBASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm11543-201ENSMUST00000120758 370 ntBASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.88■□□□□ 0.61
ScaperF8VQ70 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.88■□□□□ 0.61
ScaperF8VQ70 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ScaperF8VQ70 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ScaperF8VQ70 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.87■□□□□ 0.61
ScaperF8VQ70 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Gm18187-201ENSMUST00000196476 984 ntBASIC18.87■□□□□ 0.61
ScaperF8VQ70 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.87■□□□□ 0.61
ScaperF8VQ70 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ScaperF8VQ70 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gm15487-201ENSMUST00000122373 465 ntBASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gm38225-201ENSMUST00000194001 393 ntBASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gm43433-201ENSMUST00000196573 481 ntBASIC18.86■□□□□ 0.61
ScaperF8VQ70 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ScaperF8VQ70 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms