Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Atf6F6VAN0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf6F6VAN0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Atf6F6VAN0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Atf6F6VAN0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf6F6VAN0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.33■□□□□ 0.05
Atf6F6VAN0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Atf6F6VAN0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Atf6F6VAN0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.33■□□□□ 0.04
Atf6F6VAN0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Gm12350-201ENSMUST00000121208 462 ntBASIC15.33■□□□□ 0.04
Atf6F6VAN0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.33■□□□□ 0.04
Atf6F6VAN0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.33■□□□□ 0.04
Atf6F6VAN0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Atf6F6VAN0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Gm27300-201ENSMUST00000184085 97 ntBASIC15.32■□□□□ 0.04
Atf6F6VAN0 Gm27335-201ENSMUST00000184758 97 ntBASIC15.32■□□□□ 0.04
Atf6F6VAN0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.32■□□□□ 0.04
Atf6F6VAN0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Atf6F6VAN0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.31■□□□□ 0.04
Atf6F6VAN0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Atf6F6VAN0 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.31■□□□□ 0.04
Atf6F6VAN0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atf6F6VAN0 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms