Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.85■□□□□ 0.45
Ube4aE9Q735 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4aE9Q735 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Gm7730-201ENSMUST00000212486 454 ntBASIC17.84■□□□□ 0.45
Ube4aE9Q735 Gm9182-201ENSMUST00000217829 639 ntBASIC17.84■□□□□ 0.45
Ube4aE9Q735 Gm16476-201ENSMUST00000221544 139 ntBASIC17.84■□□□□ 0.45
Ube4aE9Q735 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ube4aE9Q735 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4aE9Q735 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.83■□□□□ 0.45
Ube4aE9Q735 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4aE9Q735 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.83■□□□□ 0.45
Ube4aE9Q735 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4aE9Q735 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4aE9Q735 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Syt7-204ENSMUST00000223586 1344 ntBASIC17.83■□□□□ 0.44
Ube4aE9Q735 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gm9726-201ENSMUST00000180321 678 ntBASIC17.83■□□□□ 0.44
Ube4aE9Q735 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gm37230-201ENSMUST00000194491 818 ntBASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gm5186-201ENSMUST00000218781 920 ntBASIC17.83■□□□□ 0.44
Ube4aE9Q735 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4aE9Q735 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gm15653-201ENSMUST00000119247 907 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gm6222-201ENSMUST00000120787 396 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Mir1897-201ENSMUST00000122581 272 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gm27631-201ENSMUST00000184163 466 ntBASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4aE9Q735 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms