Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm12208-201ENSMUST00000122004 163 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col6a3E9PWQ3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Gm13297-201ENSMUST00000120205 934 ntBASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a3E9PWQ3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Gm44126-201ENSMUST00000204831 514 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Gm45186-201ENSMUST00000206874 478 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a3E9PWQ3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Snora73a-201ENSMUST00000082453 205 ntBASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a3E9PWQ3 Gm12566-201ENSMUST00000121479 359 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Gm6621-201ENSMUST00000193251 772 ntBASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col6a3E9PWQ3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms