Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC20.64■□□□□ 0.89
Hfm1D3Z4R1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 AC110817.1-201ENSMUST00000225706 605 ntBASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hfm1D3Z4R1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Snora78-201ENSMUST00000158630 128 ntBASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Gm44799-201ENSMUST00000207639 1202 ntBASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hfm1D3Z4R1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Gm18307-201ENSMUST00000206864 949 ntBASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Gm8463-201ENSMUST00000208573 613 ntBASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hfm1D3Z4R1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Gm21009-201ENSMUST00000197169 1669 ntBASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Mir692-1-201ENSMUST00000102263 109 ntBASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hfm1D3Z4R1 App-207ENSMUST00000227737 2827 ntBASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hfm1D3Z4R1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms