Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm12887B1AVM1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.08□□□□□ -0.47
Gm12887B1AVM1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Gm12887B1AVM1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm12887B1AVM1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Gm12887B1AVM1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Grk6-207ENSMUST00000225925 2769 ntBASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm12887B1AVM1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12887B1AVM1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms