Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.98□□□□□ -0.49
Chd6A3KFM7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.98□□□□□ -0.49
Chd6A3KFM7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Gm7287-201ENSMUST00000205267 602 ntBASIC11.98□□□□□ -0.49
Chd6A3KFM7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Cts7-204ENSMUST00000225321 1257 ntBASIC11.98□□□□□ -0.49
Chd6A3KFM7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chd6A3KFM7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.97□□□□□ -0.49
Chd6A3KFM7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chd6A3KFM7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.96□□□□□ -0.49
Chd6A3KFM7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Chd6A3KFM7 Gm3222-201ENSMUST00000071282 990 ntBASIC11.96□□□□□ -0.49
Chd6A3KFM7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chd6A3KFM7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms