Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gm12138-201ENSMUST00000122180 951 ntBASIC12.58□□□□□ -0.4
Col6a4A2AX52 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gm9899-201ENSMUST00000065519 555 ntBASIC12.58□□□□□ -0.4
Col6a4A2AX52 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a4A2AX52 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a4A2AX52 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Gm44344-201ENSMUST00000200287 129 ntBASIC12.57□□□□□ -0.4
Col6a4A2AX52 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.57□□□□□ -0.4
Col6a4A2AX52 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.57□□□□□ -0.4
Col6a4A2AX52 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Gm24694-201ENSMUST00000180054 110 ntBASIC12.57□□□□□ -0.4
Col6a4A2AX52 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Gm27663-201ENSMUST00000184839 110 ntBASIC12.57□□□□□ -0.4
Col6a4A2AX52 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a4A2AX52 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gm11478-201ENSMUST00000117851 599 ntBASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gm23984-201ENSMUST00000157139 203 ntBASIC12.56□□□□□ -0.4
Col6a4A2AX52 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.56□□□□□ -0.4
Col6a4A2AX52 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gm16026-204ENSMUST00000162652 683 ntBASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 AY702102-202ENSMUST00000194651 1173 ntBASIC12.56□□□□□ -0.4
Col6a4A2AX52 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a4A2AX52 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Syt7-204ENSMUST00000223586 1344 ntBASIC12.55□□□□□ -0.4
Col6a4A2AX52 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Gm10499-201ENSMUST00000174094 934 ntBASIC12.55□□□□□ -0.4
Col6a4A2AX52 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Gm7775-201ENSMUST00000218871 853 ntBASIC12.55□□□□□ -0.4
Col6a4A2AX52 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a4A2AX52 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms