Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 AC166574.6-201ENSMUST00000227889 1806 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Mir6941-201ENSMUST00000184711 59 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm4971-201ENSMUST00000205991 1108 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm43081-201ENSMUST00000199082 1380 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm29155-201ENSMUST00000185910 269 ntBASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ubr4A2AN08 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm22331-201ENSMUST00000158066 136 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm5884-201ENSMUST00000036712 1479 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm13786-201ENSMUST00000122371 333 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm4868-201ENSMUST00000164138 789 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Gm44552-201ENSMUST00000205458 1247 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 AC107711.5-202ENSMUST00000226429 702 ntBASIC7.71□□□□□ -1.17
Ubr4A2AN08 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ubr4A2AN08 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Gm45760-201ENSMUST00000212190 1782 ntBASIC7.71□□□□□ -1.18
Ubr4A2AN08 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Gm12969-201ENSMUST00000120199 1004 ntBASIC7.71□□□□□ -1.18
Ubr4A2AN08 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC7.71□□□□□ -1.18
Ubr4A2AN08 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC7.71□□□□□ -1.18
Ubr4A2AN08 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 AC131743.5-201ENSMUST00000220775 1618 ntBASIC7.71□□□□□ -1.18
Ubr4A2AN08 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ubr4A2AN08 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Gm27023-201ENSMUST00000182372 285 ntBASIC7.7□□□□□ -1.18
Ubr4A2AN08 Mt1-202ENSMUST00000211807 1085 ntBASIC7.7□□□□□ -1.18
Ubr4A2AN08 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC7.7□□□□□ -1.18
Ubr4A2AN08 Gm12416-201ENSMUST00000120911 1008 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms