Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.67□□□□□ -0.7
Igkv4-54A0A0G2JES9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv4-54A0A0G2JES9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv4-54A0A0G2JES9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Igkv4-54A0A0G2JES9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv4-54A0A0G2JES9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.64□□□□□ -0.71
Igkv4-54A0A0G2JES9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms