Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Mir5131-201ENSMUST00000175426 93 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 AV026068-213ENSMUST00000223675 1171 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-2A0A0G2JDP3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms