Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm12008-201ENSMUST00000117791 755 ntBASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm12497-201ENSMUST00000138778 237 ntBASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm8318-201ENSMUST00000182954 872 ntBASIC11.87□□□□□ -0.51
Trav17A0A075B655 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm29518-201ENSMUST00000190858 372 ntBASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav17A0A075B655 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.86□□□□□ -0.51
Trav17A0A075B655 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.86□□□□□ -0.51
Trav17A0A075B655 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm25016-201ENSMUST00000158399 131 ntBASIC11.86□□□□□ -0.51
Trav17A0A075B655 Gm25745-201ENSMUST00000174945 133 ntBASIC11.86□□□□□ -0.51
Trav17A0A075B655 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.86□□□□□ -0.51
Trav17A0A075B655 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav17A0A075B655 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.85□□□□□ -0.51
Trav17A0A075B655 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Carlr-201ENSMUST00000181515 2574 ntBASIC11.85□□□□□ -0.51
Trav17A0A075B655 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav17A0A075B655 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms