Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm8825-201ENSMUST00000182565 998 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm4518-201ENSMUST00000182638 718 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.55□□□□□ -0.56
Trav16A0A075B653 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16A0A075B653 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Gm6623-201ENSMUST00000173570 544 ntBASIC11.54□□□□□ -0.56
Trav16A0A075B653 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav16A0A075B653 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Gm43799-201ENSMUST00000201845 579 ntBASIC11.53□□□□□ -0.56
Trav16A0A075B653 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav16A0A075B653 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms