Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav8-1A0A075B641 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav8-1A0A075B641 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav8-1A0A075B641 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav8-1A0A075B641 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav8-1A0A075B641 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Gm27463-201ENSMUST00000183569 57 ntBASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Odf3b-204ENSMUST00000227834 930 ntBASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav8-1A0A075B641 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav8-1A0A075B641 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms