Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav16d-dv11A0A075B617 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav16d-dv11A0A075B617 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav16d-dv11A0A075B617 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms