Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav4n-4A0A075B615 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Gm15039-201ENSMUST00000118914 875 ntBASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Gm27405-201ENSMUST00000184201 112 ntBASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Gm18041-201ENSMUST00000218210 618 ntBASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav4n-4A0A075B615 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav4n-4A0A075B615 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav4n-4A0A075B615 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms