Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv4A0A075B5I2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv4A0A075B5I2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv4A0A075B5I2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv4A0A075B5I2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv4A0A075B5I2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Gm27741-201ENSMUST00000185060 237 ntBASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv4A0A075B5I2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Gm18733-201ENSMUST00000173950 856 ntBASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv4A0A075B5I2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv4A0A075B5I2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv4A0A075B5I2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms