Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb2S4R1M3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H2afb2S4R1M3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Gm27300-201ENSMUST00000184085 97 ntBASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Gm27335-201ENSMUST00000184758 97 ntBASIC14.95□□□□□ -0.02
H2afb2S4R1M3 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.95□□□□□ -0.02
H2afb2S4R1M3 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Mzt1-203ENSMUST00000227948 952 ntBASIC14.95□□□□□ -0.02
H2afb2S4R1M3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afb2S4R1M3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Gm27741-201ENSMUST00000185060 237 ntBASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afb2S4R1M3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
H2afb2S4R1M3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb2S4R1M3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms