Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.01□□□□□ -0.17
Cldn6Q9Z262 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn6Q9Z262 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Gm11873-201ENSMUST00000117877 1304 ntBASIC14□□□□□ -0.17
Cldn6Q9Z262 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14□□□□□ -0.17
Cldn6Q9Z262 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14□□□□□ -0.17
Cldn6Q9Z262 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn6Q9Z262 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Cldn6Q9Z262 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn6Q9Z262 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Gm18733-201ENSMUST00000173950 856 ntBASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn6Q9Z262 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms