Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clip2Q9Z0H8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Gm15483-201ENSMUST00000120338 456 ntBASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clip2Q9Z0H8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.35■□□□□ 0.37
Clip2Q9Z0H8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Gm43474-201ENSMUST00000196415 774 ntBASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Gm43125-201ENSMUST00000201724 730 ntBASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clip2Q9Z0H8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms