Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RpgrQ9R0X5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Gm7222-201ENSMUST00000117512 906 ntBASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Gm15358-201ENSMUST00000119249 520 ntBASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RpgrQ9R0X5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RpgrQ9R0X5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gm25990-201ENSMUST00000102440 86 ntBASIC15.2■□□□□ 0.02
RpgrQ9R0X5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gm5864-201ENSMUST00000202263 970 ntBASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RpgrQ9R0X5 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm13418-201ENSMUST00000119097 944 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Gm6296-201ENSMUST00000222599 943 ntBASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RpgrQ9R0X5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms