Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Gm27622-201ENSMUST00000183779 60 ntBASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.17■□□□□ 0.18
Trim54Q9ERP3 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim54Q9ERP3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.16■□□□□ 0.18
Trim54Q9ERP3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim54Q9ERP3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.15■□□□□ 0.18
Trim54Q9ERP3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Gm38225-201ENSMUST00000194001 393 ntBASIC16.15■□□□□ 0.18
Trim54Q9ERP3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim54Q9ERP3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trim54Q9ERP3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim54Q9ERP3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms