Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps35Q9EQH3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps35Q9EQH3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps35Q9EQH3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps35Q9EQH3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vps35Q9EQH3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps35Q9EQH3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm11779-201ENSMUST00000118541 368 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps35Q9EQH3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps35Q9EQH3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms