Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hcfc2Q9D968 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Gm9013-201ENSMUST00000132939 882 ntBASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcfc2Q9D968 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Gm14722-201ENSMUST00000118943 689 ntBASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Hcfc2Q9D968 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcfc2Q9D968 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms