Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Gm7461-201ENSMUST00000058918 827 ntBASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Gm15590-201ENSMUST00000078419 552 ntBASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc3Q9CWU5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gm13036-201ENSMUST00000117799 748 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gm4899-201ENSMUST00000178708 719 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc3Q9CWU5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.33□□□□□ -0.11
Khdc3Q9CWU5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc3Q9CWU5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Mir5126-201ENSMUST00000175513 77 ntBASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Mzt1-203ENSMUST00000227948 952 ntBASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc3Q9CWU5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms