Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smurf1Q9CUN6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Carlr-201ENSMUST00000181515 2574 ntBASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Smurf1Q9CUN6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Gm21362-201ENSMUST00000194272 928 ntBASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smurf1Q9CUN6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms