Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Gm9229-201ENSMUST00000222777 126 ntBASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.22■□□□□ 0.03
Cldnd1Q9CQX5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm15806-201ENSMUST00000120696 955 ntBASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm45098-201ENSMUST00000207179 657 ntBASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd1Q9CQX5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd1Q9CQX5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Gm21854-201ENSMUST00000179901 471 ntBASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd1Q9CQX5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Gm45453-201ENSMUST00000211758 853 ntBASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cldnd1Q9CQX5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms