Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retreg3Q9CQV4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg3Q9CQV4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg3Q9CQV4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg3Q9CQV4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retreg3Q9CQV4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm10576-201ENSMUST00000191927 825 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm9723-201ENSMUST00000192100 457 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm10478-201ENSMUST00000084451 396 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.08■□□□□ 0
Retreg3Q9CQV4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retreg3Q9CQV4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm12008-201ENSMUST00000117791 755 ntBASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm11025-201ENSMUST00000140773 466 ntBASIC15.07■□□□□ 0
Retreg3Q9CQV4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retreg3Q9CQV4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm45359-201ENSMUST00000210635 427 ntBASIC15.07■□□□□ 0
Retreg3Q9CQV4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Gm18719-201ENSMUST00000196696 1413 ntBASIC15.07■□□□□ 0
Retreg3Q9CQV4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retreg3Q9CQV4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.06■□□□□ 0
Retreg3Q9CQV4 Gm21147-201ENSMUST00000186046 913 ntBASIC15.06■□□□□ 0
Retreg3Q9CQV4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.06■□□□□ 0
Retreg3Q9CQV4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Retreg3Q9CQV4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms