Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Gm13418-201ENSMUST00000119097 944 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Gm28033-201ENSMUST00000184224 96 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rer1Q9CQU3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.24□□□□□ -0.45
Rer1Q9CQU3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rer1Q9CQU3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm21362-201ENSMUST00000194272 928 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44357-201ENSMUST00000195897 142 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm19658-201ENSMUST00000196231 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44367-201ENSMUST00000196836 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44350-201ENSMUST00000197197 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44390-201ENSMUST00000197533 144 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44313-201ENSMUST00000198018 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44486-201ENSMUST00000198508 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44314-201ENSMUST00000199263 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44394-201ENSMUST00000199558 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44484-201ENSMUST00000199873 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm43347-201ENSMUST00000200226 580 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44466-201ENSMUST00000200264 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm44359-201ENSMUST00000200671 138 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms