Protein–RNA interactions for Protein: Q9CPZ1

Ccdc198, Uncharacterized protein CCDC198, mousemouse

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc198Q9CPZ1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc198Q9CPZ1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc198Q9CPZ1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gm6089-201ENSMUST00000197666 938 ntBASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc198Q9CPZ1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc198Q9CPZ1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms