Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm19164-201ENSMUST00000210667 640 ntBASIC14.14□□□□□ -0.15
Ska1Q9CPV1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ska1Q9CPV1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ska1Q9CPV1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Gm27867-201ENSMUST00000184778 125 ntBASIC14.12□□□□□ -0.15
Ska1Q9CPV1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ska1Q9CPV1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Gm12895-201ENSMUST00000122214 226 ntBASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms