Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Gm6180-201ENSMUST00000065243 498 ntBASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.99□□□□□ -0.17
Nkx6-1Q99MA9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Gm12138-201ENSMUST00000122180 951 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx6-1Q99MA9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Shd-206ENSMUST00000225145 998 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Asic1-205ENSMUST00000228185 1818 ntBASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.97□□□□□ -0.17
Nkx6-1Q99MA9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx6-1Q99MA9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms