Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cttnbp2nlQ99LJ0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gm29518-201ENSMUST00000190858 372 ntBASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cttnbp2nlQ99LJ0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cttnbp2nlQ99LJ0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Rprl3-201ENSMUST00000157400 290 ntBASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm44454-201ENSMUST00000198541 138 ntBASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cttnbp2nlQ99LJ0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms