Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Clp1Q99LI9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clp1Q99LI9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.69■□□□□ 0.1
Clp1Q99LI9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clp1Q99LI9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.68■□□□□ 0.1
Clp1Q99LI9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gm45384-201ENSMUST00000210451 277 ntBASIC15.68■□□□□ 0.1
Clp1Q99LI9 Gm45668-201ENSMUST00000211271 493 ntBASIC15.68■□□□□ 0.1
Clp1Q99LI9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clp1Q99LI9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.67■□□□□ 0.1
Clp1Q99LI9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Gm13464-201ENSMUST00000119418 935 ntBASIC15.67■□□□□ 0.1
Clp1Q99LI9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Gm25857-201ENSMUST00000082788 129 ntBASIC15.67■□□□□ 0.1
Clp1Q99LI9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clp1Q99LI9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms