Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clcc1Q99LI2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clcc1Q99LI2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Gm25948-201ENSMUST00000175334 112 ntBASIC14.74□□□□□ -0.05
Clcc1Q99LI2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Gm44872-201ENSMUST00000207864 420 ntBASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clcc1Q99LI2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clcc1Q99LI2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms