Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm27622-201ENSMUST00000183779 60 ntBASIC17.6■□□□□ 0.41
Col20a1Q923P0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Gm29541-201ENSMUST00000191351 678 ntBASIC17.6■□□□□ 0.41
Col20a1Q923P0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col20a1Q923P0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.59■□□□□ 0.41
Col20a1Q923P0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Gm14057-201ENSMUST00000120631 482 ntBASIC17.59■□□□□ 0.41
Col20a1Q923P0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.59■□□□□ 0.41
Col20a1Q923P0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.59■□□□□ 0.41
Col20a1Q923P0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col20a1Q923P0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.58■□□□□ 0.41
Col20a1Q923P0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col20a1Q923P0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.58■□□□□ 0.4
Col20a1Q923P0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.58■□□□□ 0.4
Col20a1Q923P0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Gm20949-201ENSMUST00000206478 952 ntBASIC17.58■□□□□ 0.4
Col20a1Q923P0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.58■□□□□ 0.4
Col20a1Q923P0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col20a1Q923P0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.57■□□□□ 0.4
Col20a1Q923P0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col20a1Q923P0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.56■□□□□ 0.4
Col20a1Q923P0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.56■□□□□ 0.4
Col20a1Q923P0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.56■□□□□ 0.4
Col20a1Q923P0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.56■□□□□ 0.4
Col20a1Q923P0 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms