Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha9Q91Y11 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Gm15427-201ENSMUST00000117288 531 ntBASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha9Q91Y11 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha9Q91Y11 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms