Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a4Q91VA1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a4Q91VA1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc44a4Q91VA1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a4Q91VA1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a4Q91VA1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a4Q91VA1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a4Q91VA1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.52■□□□□ 0.39
Slc44a4Q91VA1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc44a4Q91VA1 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Gm16476-201ENSMUST00000221544 139 ntBASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Dupd1-202ENSMUST00000224735 548 ntBASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc44a4Q91VA1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm4875-201ENSMUST00000118257 786 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm27631-201ENSMUST00000184163 466 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm46209-201ENSMUST00000217912 553 ntBASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc44a4Q91VA1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Slc44a4Q91VA1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Slc44a4Q91VA1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc44a4Q91VA1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms